EMBL-EBI resources: An introduction
I watched this video today.
Introduction to EMBL EBI resources www.youtube.com
Literally this video is great to understand the data sources in the view of bird eyes. The detail page is here [1].
EBI Search
Example: Search by the gene name: "BRCA1".
- Go to EBI's top page. [2]
- Search "BRCA1" (= gene name) on the text field "Find a gene, protein or chemical".
Image source: EMBL-EBI
- Move to "Search results for BRCA1" page.
Image source: EMBL-EBI
- Click "Gene & protein summaries" > "BRCA1, DNA repair associated" link.
- Move to "Gene & protein summary for BRCA1" page. (https://www.ebi.ac.uk/s4/summary/molecular?term=BRCA1&classification=9606&tid=nameOrgENSMUSG00000017146)
Gene Image source: EMBL-EBI
- Click Expression button.
Expression Image source: EMBL-EBI
- Click Protein Structure button.
Protein Structure Image source: EMBL-EBI
Europe PMC
Europe PMC = PubMed Central connected with EBI's databases. [3]
10th Anniversary Treasure Hunt
The Treasure Hunt URL is here. [4] It seems that it is the fun content to learn the EBI's data resources.
Image source: EMBL-EBI - 10th Anniversary Treasure Hunt [4]
Below image is great to know the resources in bird-eyes view.
Image source: EMBL-EBI - 10th Anniversary Treasure Hunt [5]
References
- [1] EMBL-EBI resources: An introduction: https://www.ebi.ac.uk/training/online/course/introduction-embl-ebi-resources-webinar
- [2] EMBL-EBI top page: https://www.ebi.ac.uk/
- [3] Europe PMC: http://europepmc.org
- [4] Treasure Hunt: https://www.ebi.ac.uk/training/online/course/10th-anniversary-treasure-hunt
- [5] Treasure Hunt EMBL-EBI resources: https://www.ebi.ac.uk/training/online/course/10th-anniversary-treasure-hunt/about-embl-ebi-resources