Previously I used markdown-pdf. But I found another tool to convert GitHub style PDF mdpdf [1]. And I would prefer it. junaruga.hatenablog.com mdpdf Install $ npm install mdpdf $ which mdpdf /Users/jun.aruga/node_modules/.bin/mdpdf Usage $…

As I installed Trinity RNA Seq tool, I want to do de novo sequencing to something. Genome size is base pair (= bp) size, not gene number. As to check the behavior of Trinity, small genome size (base pairs) is better. I found this NCBI's pa…

I was looking for how to covert from a Markdown file to PDF file. After finding a Stackoverflow page [1], I found markdown-pdf [2]. Install Install Nodejs at first, download "10.13.0 LTS" for Mac. $ which node /usr/local/bin/node $ node -v…

This article is about how to install and test Trinity RNA seq de novo assemble tool on Mac OSX [1]. Install Seeing Trinity .travis.yml [2] is good to know it. First, we need to use a compiler supporting Open MP [3] (= Open Multi-Processing…